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Backend APIs (Flask) exposing data from database in RESTful format

Similarity/Homology Assessment by Relating K-mers

Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.

Jenkins pipelines

openfpm_pdata

Documentations for CD-CODE project

New analyses for the "Navigating Uncertainty in Encoded Decision-Space" project. Analysis for both "Fruit Task" and "Hexagons Task."

Official MOSAIC Group software repository.

Project to quantify and measure orientation of network branches in regards to Ch iMap

private repo with testing jupyter notebooks

Code repository for various misc plk scripts.

A collection of tools to process and manipulate high-throughput sequencing data

Supplementary Jupyter notebook to our article "Lgr5+ stem/progenitor cells reside at the apex of the embryonic hepatoblast pool"