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Sbalzarini Lab / Software / Parallel Computing / OpenFPM / openfpm
BSD 3-Clause "New" or "Revised" LicenseUpdated -
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tothpetroczylab / SHARK
BSD 3-Clause "New" or "Revised" LicenseSimilarity/Homology Assessment by Relating K-mers
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Official MOSAIC Group software repository.
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New analyses for the "Navigating Uncertainty in Encoded Decision-Space" project. Analysis for both "Fruit Task" and "Hexagons Task."
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MATLAB code for Lp-Adaptation: Design Centering and Volume Approximation
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Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.
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Huch lab / Image Analysis Pipelines - Mouse liver assembloids model periportal architecture and biliary fibrosis
BSD 3-Clause "New" or "Revised" LicenseThis repository contains the image analysis pipelines for bile canaliculi analysis and mesenchyme counting associated with the paper "Mouse liver assembloids model periportal architecture and biliary fibrosis"
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Sbalzarini Lab / Software / Math / FaspHeuristic
MIT LicenseLibrary implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)
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