Explore projects

Theory analysis and code for studying Drosophila wing disc eversion

Implementation of 2D unet. Use as base for user projects.

Complementary information to the image analysis script described in the paper "Salamander Eci: an optical clearing protocol for the three-dimensional exploration of regeneration".

this repository contains Fiji scripts associated with the paper : Stefan et al., Quantitative analysis of native lipid dynamics and lipid protein interactions in living cells

This repository contains source codes and notebook demos for trainin STENCIL-NET.

Script for publication - Matrix topology guides collective cell migration in vivo

Similarity/Homology Assessment by Relating K-mers

Small scripts and bits for data processing interoperability with the cluster

Live cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities

This software package implements the identification of robust topological defects.

resolution slope calculator for Lipid xplorer

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

PDE inference from limited spatio-temporal data