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Exact stochastic simulation of intracellular transport
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Scenery - Virtual Reality and Augmented Reality framework
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Region Competition algorithm implemented as an ITK filter (C++).
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pSSAlib: Stochastic chemical network and reaction-diffusion simulation
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Sbalzarini Lab / Software / Parallel Computing / PPM-RC
GNU General Public License v3.0 onlyPPM_RC: Distributed-Memory Parallel Image Segmentation
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PPM client for diffusion on curved surfaces
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PPM client for diffusion in complex spaces
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Sbalzarini Lab / Software / Parallel Computing / PPM / ppm
GNU General Public License v3.0 onlyUpdated -
Particle Tracking C/Java Source Code
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Sbalzarini Lab / Software / Math / minter
MIT LicenseUpdated -
mirandaa / LipidXplorer
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pCMALib: a parallel FORTRAN 90 library for CMA-ES
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Sbalzarini Lab / Software / Image Representation / LibAPR
Apache License 2.0Library for producing and processing on the Adaptive Particle Representation (APR)
Topics: APRUpdated -
hidra fork, intended to exist until desy's hidra goes full open source on github or similar
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Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)
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Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.
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