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inPhase code repository

Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations for protein condensates. The code was used with MATLAB (The MathWorks) 2020b and 2021a.

This contains an image segmentation routine:

  • inPhase_Segmentation_v11.m
  • getDataAllFields.m
  • condensate_Segmentation_V4

The evaluation code uses natsort by Stephen Cobeldick, available under: https://de.mathworks.com/matlabcentral/fileexchange/47434-natural-order-filename-sort

The evaluation code uses the OME Bio-Formats package that is available under: https://docs.openmicroscopy.org/bio-formats/6.11.0/users/matlab/index.html