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Commit f6749b75 authored by incardon's avatar incardon
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Added GraphML writer

parent daf30b1c
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src/GraphMLWriter.hpp 0 → 100644
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#ifndef GRAPHML_WRITER_HPP
#define GRAPHML_WRITER_HPP
#include "map_graph.hpp"
#include <iostream>
#include <boost/fusion/include/mpl.hpp>
#include <boost/fusion/include/for_each.hpp>
#include <fstream>
/*! \brief this class is a functor for "for_each" algorithm
*
* This class is a functor for "for_each" algorithm. For each
* element of the boost::vector the operator() is called.
* Is mainly used to create a string containing all the vertex
* properties
*
*/
template<typename G>
struct vertex_prop
{
// Properties counter
int cnt = 0;
// vertex properties
std::string & v_prop;
// Attribute names
std::string * attributes_names;
// Number of attributes name defined into the vertex
int n_attr = 0;
/*! \brief Constructor
*
* Create a vertex properties list
*
* \param v_prop std::string that is filled with the graph properties in the GraphML format
* \param stub SFINAE, it basically check if G has properties names defined, if yes this
* constructor is selected over the other one
*
*/
vertex_prop(std::string & v_prop, typename G::V_type::attributes & a_name)
:v_prop(v_prop),attributes_names(a_name.name)
{
// Calculate the number of attributes name
n_attr = sizeof(a_name.name)/sizeof(std::string);
};
/*! \brief Constructor
*
* Create a vertex properties list
*
* \param v_prop std::string that is filled with the graph properties in the GraphML format
* \param n_prop number of properties
*
*/
vertex_prop(std::string & v_prop)
:v_prop(v_prop),attributes_names(NULL)
{
};
//! It call the functor for each member
template<typename T>
void operator()(T& t)
{
//! Create an entry for the attribute
if (cnt < n_attr)
{
// if it is a yFile extension property name, does not process it
if (attributes_names[t] == "x" || attributes_names[t] == "y"
|| attributes_names[t] == "z" || attributes_names[t] == "shape" )
{cnt++; return ;}
// Create a property string based on the type of the property
if (typeid(T) == typeid(float))
v_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"float\"/>";
else if (typeid(T) == typeid(double))
v_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"double\"/>";
else if (typeid(T) == typeid(int))
v_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"int\"/>";
else if (typeid(T) == typeid(long int))
v_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"long\"/>";
else if (typeid(T) == typeid(bool))
v_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"boolean\"/>";
else if (typeid(T) == typeid(std::string))
v_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"string\"/>";
}
cnt++;
}
};
/*! \brief this class is a functor for "for_each" algorithm
*
* This class is a functor for "for_each" algorithm. For each
* element of the boost::vector the operator() is called.
* Is mainly used to create a string containing all the vertex
* properties
*
*/
template<typename G>
struct vertex_node
{
// Vertex object container
const typename G::V_container & vo;
// Properties counter
int cnt = 0;
// vertex counter
size_t v_c = 0;
// vertex node string
std::string & v_node;
// vertex yFile geometry extension
std::string yFile_geometry_ext;
// vertex yFile shape extension
std::string yFile_shape_ext;
// Attribute names
std::string * attributes_names;
// Number of attributes name defined into the vertex
int n_attr = 0;
/*! \brief Constructor
*
* Create a vertex node
*
* \param v_node std::string that is filled with the graph node definition in the GraphML format
* \param n_obj object container to access its properties for example encapc<...>
* \param stub SFINAE, it basically check if G has properties names defined, if yes this
* constructor is selected over the other one
*
*/
vertex_node(std::string & v_node, const typename G::V_container & n_obj, typename G::V_type::attributes & a_name)
:vo(n_obj),v_node(v_node),attributes_names(a_name.name)
{
// Calculate the number of attributes name
n_attr = sizeof(a_name.name)/sizeof(std::string);
};
/*! \brief Constructor
*
* Create a vertex properties list
*
* \param v_prop std::string that is filled with the graph properties in the GraphML format
* \param n_obj object container to access its properties for example encapc<...>
* \param n_prop number of properties
*
*/
vertex_node(std::string & v_node, const typename G::V_container & n_obj)
:vo(n_obj),v_node(v_node),attributes_names(NULL)
{
};
/*! \brief Create a new node
*
* Create a new node
*
*/
void new_node()
{
// start a new node
v_node += "<node id=\"n"+ std::to_string(v_c) + "\">";
// reset the counter properties
cnt = 0;
// reset the yFile geometry extension node
yFile_geometry_ext.clear();
// reset the yFile shape extension node
yFile_shape_ext.clear();
}
/*! \brief Close a node
*
* Close a node
*
*/
void end_node()
{
// close a node
v_node += "</node>";
}
//! It call the functor for each member
template<typename T>
void operator()(T& t)
{
//! Create an entry for the attribute
if (T::value < n_attr)
{
// if it is a yFile extension property name process as yFile extension
if (attributes_names[T::value] == "x")
{yFile_geometry_ext += " x=" + std::to_string(vo.template get<T::value>());}
else if (attributes_names[T::value] == "y")
{yFile_geometry_ext += " x=" + std::to_string(vo.template get<T::value>());}
else if (attributes_names[T::value] == "z")
{yFile_geometry_ext += " z=" + std::to_string(vo.template get<T::value>());}
else if (attributes_names[T::value] == "shape" )
{yFile_shape_ext += " shape=" + std::to_string(vo.template get<T::value>());}
else
{
// Create a property string based on the type of the property
if (typeid(decltype(vo.template get<T::value>())) == typeid(float))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(double))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(int))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(long int))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(bool))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(std::string))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
}
}
cnt++;
}
};
/*! \brief this class is a functor for "for_each" algorithm
*
* This class is a functor for "for_each" algorithm. For each
* element of the boost::vector the operator() is called.
* Is mainly used to create a string containing all the edge
* properties
*
*/
template<typename G>
struct edge_prop
{
// Properties counter
int cnt = 0;
// edge properties
std::string & e_prop;
// Attribute names
std::string * attributes_names;
// Number of attributes name defined into the vertex
int n_attr = 0;
/*! \brief Constructor
*
* Create an edge properties list
*
* \param e_prop std::string that is filled with the graph properties in the GraphML format
* \param stub SFINAE, it basically check if G::E_type has properties names defined, if yes this
* constructor is selected over the other one
*
*/
edge_prop(std::string & e_prop, typename G::E_type::attributes & a_name)
:e_prop(e_prop),attributes_names(a_name.name)
{
// Calculate the number of attributes name
n_attr = sizeof(a_name.name)/sizeof(std::string);
};
/*! \brief Constructor
*
* Create an edge properties list
*
* \param e_prop std::string that is filled with the graph properties in the GraphML format
* \param n_prop number of properties
*
*/
edge_prop(std::string & v_prop)
:e_prop(e_prop),attributes_names(NULL)
{
};
//! It call the functor for each member
template<typename T>
void operator()(T& t)
{
//! Create an entry for the attribute
if (cnt < n_attr)
{
// if it is a yFile extension property name, does not process it
if (attributes_names[t] == "x" || attributes_names[t] == "y"
|| attributes_names[t] == "z" || attributes_names[t] == "shape" )
{cnt++; return ;}
// Create a property string based on the type of the property
if (typeid(T) == typeid(float))
e_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"float\"/>";
else if (typeid(T) == typeid(double))
e_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"double\"/>";
else if (typeid(T) == typeid(int))
e_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"int\"/>";
else if (typeid(T) == typeid(long int))
e_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"long\"/>";
else if (typeid(T) == typeid(bool))
e_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"boolean\"/>";
else if (typeid(T) == typeid(std::string))
e_prop += "<key id=\"v" + std::to_string(cnt) + "\" for=\"node\" attr.name=" + attributes_names[t] + " attr.type=\"string\"/>";
}
cnt++;
}
};
/*! \brief this class is a functor for "for_each" algorithm
*
* This class is a functor for "for_each" algorithm. For each
* element of the boost::vector the operator() is called.
* Is mainly used to create a string containing all the edge
* properties
*
*/
template<typename G>
struct edge_node
{
// Vertex object container
const typename G::E_container & vo;
// Properties counter
int cnt = 0;
// vertex counter
size_t v_c = 0;
// edge node string
std::string & e_node;
// edge yFile geometry extension
std::string yFile_geometry_ext;
// edge yFile shape extension
std::string yFile_shape_ext;
// Attribute names
std::string * attributes_names;
// Number of attributes name defined into the vertex
int n_attr = 0;
/*! \brief Constructor
*
* Create an edge node
*
* \param e_node std::string that is filled with the graph node definition in the GraphML format
* \param n_obj object container to access the object properties for example encapc<...>
* \param stub SFINAE, it basically check if G has properties names defined, if yes this
* constructor is selected over the other one
*
*/
edge_node(std::string & e_node, const typename G::E_container & n_obj, typename G::E_type::attributes & a_name)
:vo(n_obj),e_node(e_node),attributes_names(a_name.name)
{
// Calculate the number of attributes name
n_attr = sizeof(a_name.name)/sizeof(std::string);
};
/*! \brief Constructor
*
* Create an edge node
*
* \param e_node std::string that is filled with the graph properties in the GraphML format
* \param n_obj object container to access the object properties for example encapc<...>
* \param n_prop number of properties
*
*/
edge_node(std::string & v_node, const typename G::V_container & n_obj)
:vo(n_obj),e_node(e_node),attributes_names(NULL)
{
};
/*! \brief Create a new node
*
* Create a new node
*
*/
void new_node()
{
// start a new node
e_node += "<node id=\"n"+ std::to_string(v_c) + "\">";
// reset the counter properties
cnt = 0;
// reset the yFile geometry extension node
yFile_geometry_ext.clear();
// reset the yFile shape extension node
yFile_shape_ext.clear();
}
/*! \brief Close a node
*
* Close a node
*
*/
void end_node()
{
// close a node
v_node += "</node>";
}
//! It call the functor for each member
template<typename T>
void operator()(T& t)
{
//! Create an entry for the attribute
if (T::value < n_attr)
{
// if it is a yFile extension property name process as yFile extension
if (attributes_names[T::value] == "x")
{yFile_geometry_ext += " x=" + std::to_string(vo.template get<T::value>());}
else if (attributes_names[T::value] == "y")
{yFile_geometry_ext += " x=" + std::to_string(vo.template get<T::value>());}
else if (attributes_names[T::value] == "z")
{yFile_geometry_ext += " z=" + std::to_string(vo.template get<T::value>());}
else if (attributes_names[T::value] == "shape" )
{yFile_shape_ext += " shape=" + std::to_string(vo.template get<T::value>());}
else
{
// Create a property string based on the type of the property
if (typeid(decltype(vo.template get<T::value>())) == typeid(float))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(double))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(int))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(long int))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(bool))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
else if (typeid(decltype(vo.template get<T::value>())) == typeid(std::string))
v_node += "<data key=\"key" + std::to_string(cnt) + "\">" + std::to_string(vo.template get<T::value>()) + "</>";
}
}
cnt++;
}
};
/*!
*
* From a Graphbasic structure it write a GraphML format file
*
*/
template <typename Graph>
class GraphMLWriter
{
Graph & g;
/*! \brief It get the vertex properties list
*
* It get the vertex properties list of the vertex defined as a GraphML header
* x y z and shape are reserved properties name for yFile extension, and
* define position and shape of the node
*
* \return a string that define the vertex properties in graphML format
*
*/
std::string get_vertex_properties_list()
{
//! vertex property output string
std::string v_out("<key id=\"d0\" for=\"node\" yfiles.type=\"nodegraphics\"/>");
// create a vertex property functor
vertex_prop<Graph> vp(v_out);
// Iterate through all the vertex and create the vertex list
boost::mpl::for_each< typename Graph::V_type::type >(vp);
// return the vertex properties string
return v_out;
}
/*! \brief It get the edge properties list
*
* It get the edge properties list of the edge defined as a GraphML header
*
* \return a string that define the edge properties in graphML format
*
*/
std::string get_edge_properties_list()
{
//! edge property output string
std::string v_out;
// create a vertex property functor
edge_prop<Graph> vp(v_out);
// Iterate through all the vertex and create the vertex list
boost::mpl::for_each< typename Graph::E_type::type >(vp);
// return the edge properties string
return v_out;
}
std::string get_vertex_list()
{
//! vertex node output string
std::string v_out;
//! Get a vertex iterator
auto it = g.getVertexIterator();
// if there is the next element
while (it.isNext())
{
// create a vertex list functor
vertex_node<Graph> vn(v_out,g.vertex(it.get()));
// Iterate through all the vertex and create the vertex list
boost::mpl::for_each< typename Graph::V_type::type >(vn);
// increment the operator
++it;
}
// return the vertex list
return v_out;
}
std::string get_edge_list()
{
//! edge node output string
std::string v_out;
//! Get an edge iterator
auto it = g.getEdgeIterator();
// if there is the next element
while (it.isNext())
{
// create an edge list functor
edge_node<Graph> en(v_out,g.edge(it));
// Iterate through all the vertex and create the vertex list
boost::mpl::for_each< typename Graph::E_type::type >(en);
// increment the operator
++it;
}
// return the edge list
return v_out;
}
public:
/*!
*
* GraphMLWriter constructor, it take a graph and write a GraphML format
*
* \param g Graph to write
*
*/
GraphMLWriter(Graph & g)
:g(g)
{}
/*! \brief It write a GraphML file from a graph
*
* \param file path where to write
* \param name of the graph
*
*/
bool write(std::string file, std::string graph_name="Graph")
{
// Header for the GraphML
std::string gml_header;
// Vertex list of the GraphML
std::string vertex_list;
// End for the GraphML
std::string gml_header_end;
// Graph header
std::string graph_header;
// Graph header end
std::string graph_header_end;
// Edge list of the GraphML
std::string edge_list;
// vertex properties header
std::string vertex_prop_header;
// edge properties header
std::string edge_prop_header;
// GraphML header
gml_header = "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\
<graphml xmlns=\"http://graphml.graphdrawing.org/xmlns\"\
xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\"\
xsi:schemaLocation=\"http://graphml.graphdrawing.org/xmlns\
http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd\">";
// Graph header to define an header
graph_header = "<graph id=" + graph_name + " edgedefault=\"directed\">";
// Graph header end
graph_header_end = "</graph>";
// Vertex properties header
vertex_prop_header = get_vertex_properties_list();
// Edge properties header
edge_prop_header = get_edge_properties_list();