Commits · 45aed779883d72542f6f3168ef9dc207fa8115c6 · Nuno Pimpão Santos Martins / Contrast Enhancement with UNet · GitLab

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Jul 08, 2023
- update to concatenation script · 45aed779
  Nuno Pimpão Santos Martins authored 1 year ago
  
  45aed779
- script to compute mse to noisy raw data · f5adf1ff
  Nuno Pimpão Santos Martins authored 1 year ago
  
  f5adf1ff
- fixed bugs and typos in mse batch script · a327745c
  Nuno Pimpão Santos Martins authored 1 year ago
  
  a327745c
- add mae function · f4670b73
  Nuno Pimpão Santos Martins authored 1 year ago
  
  f4670b73
- fixed some bugs stacking arrays to save · cac88c5e
  Nuno Pimpão Santos Martins authored 1 year ago
  
  cac88c5e
- fixed bug in mse computation · 73189c19
  Nuno Pimpão Santos Martins authored 1 year ago
  
  73189c19
- fixed typo in mse batch script to properly print names · dd49eeae
  Nuno Pimpão Santos Martins authored 1 year ago
  
  dd49eeae
- new function to compute mse · d3200e94
  Nuno Pimpão Santos Martins authored 1 year ago
  
  d3200e94
- new script to compute mse between different images · 12fc7c26
  Nuno Pimpão Santos Martins authored 1 year ago
  
  12fc7c26
- update to plotting notebook · 2c2fee19
  Nuno Pimpão Santos Martins authored 1 year ago
  
  2c2fee19
- update usage of processing and concatenation scripts · d0683ad6
  Nuno Pimpão Santos Martins authored 1 year ago
  
  d0683ad6
Jul 07, 2023
- minor updates to notebook for image normalization · bb29fff3
  Nuno Pimpão Santos Martins authored 1 year ago
  
  bb29fff3
- add notebook to replace all model bias values to zero · 9f37d153
  Nuno Pimpão Santos Martins authored 1 year ago
  
  9f37d153
- updates to concatenation script to include folders with different dates · 01196767
  Nuno Pimpão Santos Martins authored 1 year ago
  
  01196767
- update main batch for a new analysis · 2e4c00be
  Nuno Pimpão Santos Martins authored 1 year ago
  
  2e4c00be
- add excep when computing PCI to prevent stopping when dividing by zero · 26c0259e
  Nuno Pimpão Santos Martins authored 1 year ago
  
  26c0259e
Jul 05, 2023
- update to multiple enhance line plot notebook · a88d3c84
  Nuno Pimpão Santos Martins authored 1 year ago
  
  a88d3c84
Jun 29, 2023
- new notebook for line plots of multiple enhancement rounds · edad07d8
  Nuno Pimpão Santos Martins authored 1 year ago
  
  edad07d8
Jun 28, 2023
- update to quantitative data plots · 07e0eaea
  Nuno Pimpão Santos Martins authored 1 year ago
  
  07e0eaea
- line plots of qualitative fig, update names and line thickness · 76ae5dae
  Nuno Pimpão Santos Martins authored 1 year ago
  
  76ae5dae
- further updates to quantitative data plots · 4c538bf3
  Nuno Pimpão Santos Martins authored 1 year ago
  
  4c538bf3
Jun 27, 2023
- updates to quantification data plots · 0b140659
  Nuno Pimpão Santos Martins authored 1 year ago
  
  0b140659
- more updates to data plots · e497d460
  Nuno Pimpão Santos Martins authored 1 year ago
  
  e497d460
- update to quantification plotss · b67535c1
  Nuno Pimpão Santos Martins authored 1 year ago
  
  b67535c1
Jun 05, 2023
- updated plots of quantification · e098c98f
  Nuno Pimpão Santos Martins authored 1 year ago
  
  e098c98f
Jun 02, 2023
- update to violin plot notebook with more plots · 2d7e2f72
  Nuno Pimpão Santos Martins authored 1 year ago
  
  2d7e2f72
- data concat script, add column with real Z position, inverted · 84d087f7
  Nuno Pimpão Santos Martins authored 1 year ago
  
  84d087f7
- script concatenate datam, add additional check to exclude inf lines · 3c444568
  Nuno Pimpão Santos Martins authored 1 year ago
  
  3c444568
- update script to concatenate data metrics to include all datapoints · cfe5b7c0
  Nuno Pimpão Santos Martins authored 1 year ago
  
  cfe5b7c0
May 31, 2023
- add notebook for violin plot and simple stats of psnr · 746da555
  Nuno Pimpão Santos Martins authored 1 year ago
  
  746da555
- quick fixes to psnr concatenation script · 44d58518
  Nuno Pimpão Santos Martins authored 1 year ago
  
  44d58518
- add script to concatenate all psnr values in single file · 435a6892
  Nuno Pimpão Santos Martins authored 1 year ago
  
  435a6892
- some fixes for batch psnr computation script · 3f2fc6fc
  Nuno Pimpão Santos Martins authored 1 year ago
  
  3f2fc6fc
- psnr method measures psnr at each plane and returns array of values · 2a87c3e1
  Nuno Pimpão Santos Martins authored 1 year ago
  
  2a87c3e1
- add script to measure psnr for double degraded test images · f180299d
  Nuno Pimpão Santos Martins authored 1 year ago
  
  f180299d
- add method to measure psnr · 67a8ef93
  Nuno Pimpão Santos Martins authored 1 year ago
  
  67a8ef93
Mar 09, 2023
- update several images and saved notebook changes · 8bc1e645
  Nuno Pimpão Santos Martins authored 2 years ago
  
  8bc1e645
Mar 02, 2023
- add notebook for supp fig2 plots · 2e4dbf68
  Nuno Pimpão Santos Martins authored 2 years ago
  
  2e4dbf68
- update jupyter notebook supp fig 1 plots · 869640ac
  Nuno Pimpão Santos Martins authored 2 years ago
  
  869640ac
- Merge branch 'main' of git.mpi-cbg.de:pimpaoma/contrast-enhancement-with-unet · 2ec88321
  Nuno Pimpão Santos Martins authored 2 years ago
  
  merge unpulled changes with new changes
  2ec88321