Commit 93f73563 authored by rhaase's avatar rhaase

added exercise data

parent 348e0b20
,Area
1,3224
2,3137
3,2653
4,2442
5,1145
6,2558
7,2768
8,1485
9,2731
10,2515
11,2756
12,2430
13,3200
14,2226
15,3335
16,132
17,2196
18,2668
19,2897
20,2952
21,2913
22,2897
23,1353
24,2061
25,3103
26,2860
27,2618
28,2639
29,2113
30,166
31,155
32,1827
33,568
// clean up first
run("Close All");
roiManager("reset");
// load sample data
run("Embryos (42K)");
// convert it to make it processable
run("8-bit");
// duplicate the image before we process it
run("Duplicate...", " ");
// blur it a bit to remove noise
run("Gaussian Blur...", "sigma=2");
setAutoThreshold("Default");
// Segmentation
setOption("BlackBackground", true);
run("Convert to Mask");
// Binary image postprocessing
run("Fill Holes");
run("Watershed");
run("Erode");
run("Erode");
run("Erode");
run("Dilate");
run("Dilate");
run("Dilate");
// configure: area measurement
run("Set Measurements...", "area redirect=None decimal=3");
// measure area and show ROIs in ROI manager
run("Analyze Particles...", "display add");
// visualize results on original image
close();
roiManager("show all with labels");
\ No newline at end of file
,Area
1,2128
2,1640
3,2828
4,2560
5,2560
6,2644
7,2368
8,2632
9,2468
10,2672
11,2552
12,3124
13,2536
14,3016
15,3620
16,3308
17,2552
18,2732
19,2732
20,3532
21,3124
22,3532
23,1648
24,2732
25,3176
26,2732
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