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Commit 9b972130 authored by Holger Brandl's avatar Holger Brandl
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cont. helin dge analysis

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dge_workflow/dge_utils.sh
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...@@ -287,7 +287,7 @@ cp -r . $tmpDbDir ...@@ -287,7 +287,7 @@ cp -r . $tmpDbDir
genome=$(echo $gtfFile | cut -f7 -d'/'); echo "genome is $genome" genome=$(echo $gtfFile | cut -f7 -d'/'); echo "genome is $genome"
## make sure to use temp-r to avoid file locking problems ## make sure to use temp-r to avoid file locking problems
R_LIBS=/tmp/r_index export R_LIBS=/tmp/r_index
echo ' echo '
require(cummeRbund) require(cummeRbund)
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