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Commit b31b589b authored by Holger Brandl's avatar Holger Brandl
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switched back to furiosa config

parent 5e202da3
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......@@ -112,8 +112,8 @@ for (fastqFile in fastqFiles) {
// todo provide proper walltime here
// slurm memory limit https://rc.fas.harvard.edu/resources/documentation/slurm-memory/
// sacct -o MaxRSS -j JOBID
// jl.run(JobConfiguration(cmd, "star__${fastqBaseName}", "10:00", "", 5, 40000, "", better.files.File(File(".").toPath())))
jl.run(JobConfiguration(cmd, "star__${fastqBaseName}", "", "medium", 5, 0, "", better.files.File(File(".").toPath())))
jl.run(JobConfiguration(cmd, "star__${fastqBaseName}", "10:00", "", 5, 40000, "", better.files.File(File(".").toPath())))
// jl.run(JobConfiguration(cmd, "star__${fastqBaseName}", "", "medium", 5, 0, "", better.files.File(File(".").toPath())))
}
......
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