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  • #25

Closed
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Created Nov 16, 2017 by brandl@brandlOwner

report improvements

  • remove pointless R output [done]
  • include materials and methods section
  • explain algn efficiency
  • more docu for lib-complexity in fastqc report
  • add Figure 9.3: Features: genes seen in the whole data set. The x-axis displays the number of uniquely aligned fragments and the y-axis shows how many features are seen within each x subset of fragments.
  • add PCA (1−2) of top 500 most diverse genes
  • add toc (floating if we can adjust content width) or via markdown if not [done]
  • detail out column model of main results table(s)
  • render ensbml link in interactive table (make sure to also include non-ensembl data)
  • prep example data for testing
  • use symbols for "Extract most signifiantly changed genes and display" heatmap (if present)
Edited Jan 19, 2018 by brandl
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