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  • belicova_mouse__20170519
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  • meyer_rnaseq__20170315
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Created with Raphaël 2.2.018Oct121116Sep15149626Aug244128Jul8765124Jun151432130May2625201917131211109428Apr2012864124Mar2117161582129Feb26252423854129Jan2726158765418Dec1611982112Nov963228Oct2322211918728Sep2221181716151187331Aug2524201930Jul2923211714133130Jun29242319161511109321May20191230Apr2928272316987131Mar2720181716131211109413Feb123228Jan272114619Dec181712118528Nov272624212014cosmeticsupdated dependenciesadded issue #11 comment; refac of diffex workflow to current Radded enrichr wrapper for Rincreased jl version to 0.7cont. loss gaincont sgo2 reportcont. gene characterizationrefac of common clusterProfiler utilsadded bedopsredo orfs on gmap cdsupdated deps to kutils 0.2-snapshotadded tx alignmentsfixed to work with latest bioc-devcont gsea wrappermoved utility cp functions into commonscosmeticsstarted gsea enrichment toolfinished basic results integrationported fc analysis to h3ha datamodernized chipseq utilitiesfixed partition nameadded bedtools to PATHfixed package loading for R3.3cosmeticsreadded csvkit path for madmaxmadmaxmadmaxuse abs.max for gene aggregationfixed for pe alignmentscontinued read mappingMerge branch 'master' of git.mpi-cbg.de:bioinfo/ngs_toolsadded bioinfo-srv1 compatibilityadded iml files to ignore listavoid that _2.fastqs are mappinguse abs.max for gene aggregationswitched back to furiosa configMerge branch 'master' of git.mpi-cbg.de:bioinfo/ngs_toolsfixed madmax configexpose q-cutoff as parametercosmeticsMerge remote-tracking branch 'remotes/origin/madmax'
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