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bioinfo
ngs_tools
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614e8317a43683d157e61a8809faa127f3aa515c
Select Git revision
Branches
7
corescf
dev_genic_counts
gsea_dev
madmax
master
default
protected
star_kotlin_stranded
v1.1
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belicova_mouse__20170519
moath_rnaseq__20170424
fam72d_transfection_seq__20170315
meyer_rnaseq__20170315
22 results
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cosmetics
updated dependencies
added issue #11 comment; refac of diffex workflow to current R
added enrichr wrapper for R
increased jl version to 0.7
cont. loss gain
cont sgo2 report
cont. gene characterization
refac of common clusterProfiler utils
added bedops
redo orfs on gmap cds
updated deps to kutils 0.2-snapshot
added tx alignments
fixed to work with latest bioc-dev
cont gsea wrapper
moved utility cp functions into commons
cosmetics
started gsea enrichment tool
finished basic results integration
ported fc analysis to h3ha data
modernized chipseq utilities
fixed partition name
added bedtools to PATH
fixed package loading for R3.3
cosmetics
readded csvkit path for madmax
madmax
madmax
use abs.max for gene aggregation
fixed for pe alignments
continued read mapping
Merge branch 'master' of git.mpi-cbg.de:bioinfo/ngs_tools
added bioinfo-srv1 compatibility
added iml files to ignore list
avoid that _2.fastqs are mapping
use abs.max for gene aggregation
switched back to furiosa config
Merge branch 'master' of git.mpi-cbg.de:bioinfo/ngs_tools
fixed madmax config
expose q-cutoff as parameter
cosmetics
Merge remote-tracking branch 'remotes/origin/madmax'
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