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Similarity/Homology Assessment by Relating K-mers

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Completly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files

Backend APIs (Flask) exposing data from database in RESTful format

Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"

Complementary information to the image analysis script described in the paper "Salamander Eci: an optical clearing protocol for the three-dimensional exploration of regeneration".

Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"

this repository contains Fiji scripts associated with the paper : Stefan et al., Quantitative analysis of native lipid dynamics and lipid protein interactions in living cells

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.

Code accompanying "Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks", Maddu et al., 2021

A web service for calculating the Levenshtein distance between two sequences

Theory analysis and code for studying Drosophila wing disc eversion

Quantitative analysis of diacylglycerol signaling kinetics in single cells

This software package implements the identification of robust topological defects.

Python package of the deTEL translation error detection pipeline from mass-spectrometry data

MotionTracking project to Analyze Hepatocyte Cages.