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Sbalzarini Lab / Software / Math / FaspHeuristic
MIT LicenseLibrary implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)
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pCMALib: a parallel FORTRAN 90 library for CMA-ES
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Matlab toolbox and a tutorial on trajectory segmentation
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Repository containing the Matlab code used in Iglesias et al - Charge density reduction promotes ribozyme activity in RNA-peptide protocells via fluidization and magnesium partitioning.
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Scientific Computing / Schuhmacher et al 2020. Live cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities.
BSD 3-Clause "New" or "Revised" LicenseLive cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities
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Scientific Computing / Belicova_et_al_BC_morphogenesis
BSD 3-Clause "New" or "Revised" Licensescripts related to the publication
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MATLAB code for Lp-Adaptation: Design Centering and Volume Approximation
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Exact stochastic simulation of intracellular transport
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MATLAB toolbox for particle tracking
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MATLAB implementation of image naturalization
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MATLAB code for deconvolving snakes
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MATLAB Toolbox for cell-outline segmentation in phase-contrast images
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A MATLAB implementation of the split-Bregman algorithm for image segmentation
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Interaction Analysis Toolbox for MATLAB
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Scientific Computing / Soans_et_al_opticalcup_surface
BSD 3-Clause "New" or "Revised" LicenseScript for publication - Matrix topology guides collective cell migration in vivo
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Segmentation of the basal cell-matrix contact sites on laminin structure
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