Explore projects

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)

A web service for calculating the Levenshtein distance between two sequences

real-time in-situ visualization of distributed numerical simulations

Implementation of the fast curvature filters for images.

Brownian dynamics simulation of cross-linked filament bundles

Particle Tracking C/Java Source Code

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

PPM client for diffusion in complex spaces

Forthreads Library

pSSAlib: Stochastic chemical network and reaction-diffusion simulation