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hidra fork, intended to exist until desy's hidra goes full open source on github or similar

Forthreads Library

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

PPM client for diffusion on curved surfaces

PPM client for diffusion in complex spaces

Brownian dynamics simulation of cross-linked filament bundles

pCMALib: a parallel FORTRAN 90 library for CMA-ES

Particle Tracking C/Java Source Code

Implementation of the fast curvature filters for images.

real-time in-situ visualization of distributed numerical simulations

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.