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publications / nadler / 2022 Barahtjan and Iglesias Artola et al. Monosaccharide imaging
MIT LicenseBifunctional Monosaccharides Preferentially Localize to Nuclear Subcompartments
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Repository containing the scripts used in Iglesias-Artola et al 2024. Quantitative imaging of species-specific lipid transport in mammalian cells
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rhaase / ABIA_Prague_2019
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
A MATLAB implementation of the split-Bregman algorithm for image segmentation
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Analysis of ARE in liver tissue. with Julien Delpierre
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assembly / asm_wPlaDum
MIT LicenseUpdated -
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Scientific Computing / Belicova_et_al_BC_morphogenesis
BSD 3-Clause "New" or "Revised" Licensescripts related to the publication
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gef / bigStitcherMacros
BSD 3-Clause "New" or "Revised" LicenseUpdated -
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Backend APIs (Flask) exposing data from database in RESTful format
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Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"
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walker / cellpose_explore
BSD 3-Clause "New" or "Revised" LicenseExploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation
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