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Region Competition algorithm implemented as an ITK filter (C++).

Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)

real-time in-situ visualization of distributed numerical simulations

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

Library for producing and processing on the Adaptive Particle Representation (APR)

Data and code for "impossible ecologies" paper

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.