Commits · a4d33682aaec2b715fccff648d1a019eab1970ab · hubatsch / Frap Theory

Dec 08, 2020
- Introduce defaults parameters for pdepe. · a4d33682
  Lars Hubatsch authored 4 years ago
  
  a4d33682
Nov 17, 2020
- Initial condition corrected to match proper client profile. · e3839e8a
  Lars Hubatsch authored 4 years ago
  
  e3839e8a
Oct 14, 2020
- Offset now relative to phi tot inside. · efdec659
  Lars Hubatsch authored 4 years ago
  
  efdec659
Oct 07, 2020
- Introducing fractional bleach in model. · 8e7d1037
  Lars Hubatsch authored 4 years ago
  
  8e7d1037
Sep 29, 2020
- Comparison ML Python works. Spherical still off. Slab fine. · a9c0d6b5
  Lars Hubatsch authored 4 years ago
  
  a9c0d6b5
Sep 08, 2020
- Flux and total intensity inside similar up to a factor. · 1885499d
  Lars Hubatsch authored 4 years ago
  
  1885499d
Aug 27, 2020
- Fokker-Planck FRAP jump length works. · 08783414
  Lars Hubatsch authored 4 years ago
  
  08783414
Aug 05, 2020
- Adding normalization factors. Cleaning up. · 04f59817
  Lars Hubatsch authored 4 years ago
  
  04f59817
Aug 04, 2020
- Adding equilibrium initial condition, called phi_tot. · adb20417
  Lars Hubatsch authored 4 years ago
  
  adb20417
Jul 30, 2020
- Automatic distinction between client and constituent equations. · ad18b356
  Lars Hubatsch authored 4 years ago
  
  ad18b356
Jul 22, 2020
- FRAP plot works. · 87ac3b65
  Lars Hubatsch authored 4 years ago
  
  87ac3b65
- Moving boundary agrees in principle with Langevin. · eb8ab15b
  Lars Hubatsch authored 4 years ago
  
  eb8ab15b
- Uniform mesh, eq. temporarily changed to client. Uniform IC. · 96658c52
  Lars Hubatsch authored 4 years ago
  
  96658c52
Jul 18, 2020
- WIP: continue work on moving boundary. Step function for mesh. · faa776dd
  Lars Hubatsch authored 4 years ago
  
  faa776dd
- WIP: introducing moving boundary. v=0 works as expected. · 5f1b99c3
  Lars Hubatsch authored 4 years ago
  
  5f1b99c3
Jul 17, 2020
- Meshing now symmetric around boundary. Gamma0=1 now implicit. · c986a170
  Lars Hubatsch authored 4 years ago
  
  c986a170
May 15, 2020
- Reversing initial conditions. Now pure FRAP again. · 87a31be3
  Lars Hubatsch authored 4 years ago
  
  87a31be3
May 12, 2020
- Fit works for PGL-3. No correction for ICs. · 98ec59e6
  Lars Hubatsch authored 4 years ago
  
  98ec59e6
May 11, 2020
- Can now have non-step IC for FRAP. · b84d3876
  Lars Hubatsch authored 4 years ago
  
  b84d3876
Apr 27, 2020
- Experimental initial conditions now possible. Not correct for outside. · 496b027c
  Lars Hubatsch authored 4 years ago
  
  496b027c
Apr 07, 2020
- WIP on integrating probabilites for jump length. This roughly works, but not perfect. · edcca35d
  Lars Hubatsch authored 4 years ago
  
  edcca35d
Apr 02, 2020
- Code used for sims sent to Stefano. Vary x0 close to boundary. · b7aa877b
  Lars Hubatsch authored 4 years ago
  
  b7aa877b
Mar 27, 2020
- Readding Gamma_0 in Python and Matlab, still works. · fda5e299
  Lars Hubatsch authored 5 years ago
  
  fda5e299
Mar 26, 2020
- Comparison with Stefano's code for different meshs. Finer meshing for safety. · 4a05695c
  Lars Hubatsch authored 5 years ago
  
  Code can be run for nu=10^-15 or 10^-6, significant deviations for precision=1.
  4a05695c
Mar 25, 2020

Solutions sent to Stefano. Introduce IC Gauss parameter x0. · 8597f5fc

Lars Hubatsch authored 5 years ago

Also introduce check for mass conservation in prob_laplace. Currently
does not sum to 1, a factor of 2 is missing somewhere.

8597f5fc

Mar 23, 2020
- Create Matlab file for comparison between FEM and FD. · d4712912
  Lars Hubatsch authored 5 years ago
  
  d4712912
- Revert "Corrected BCs for new definition of u0, e. Renamed o_g0." · 0cdda870
  Lars Hubatsch authored 5 years ago
  
  This reverts commit 93f115a6.
  0cdda870
- Corrected BCs for new definition of u0, e. Renamed o_g0. · 93f115a6
  Lars Hubatsch authored 5 years ago
  
  93f115a6
- Corrected boundary conditions for new definition of u0, e etc.. Renamed o_g0 · 9413dd41
  Lars Hubatsch authored 5 years ago
  
  9413dd41
Mar 19, 2020
- Simplified phi_tot and gradient of phi_tot. Now works with Stefanos parameters, except IC. · 50448ed0
  Lars Hubatsch authored 5 years ago
  
  50448ed0
Mar 12, 2020
- Minor changes to Matlab for clean tree. · 20b0079f
  Lars Hubatsch authored 5 years ago
  
  20b0079f
Feb 12, 2020
- Making geometry a parameter. · 8efd1d20
  Lars Hubatsch authored 5 years ago
  
  8efd1d20
- Making initial condition a parameter. · 8cd4f95d
  Lars Hubatsch authored 5 years ago
  
  8cd4f95d
Feb 11, 2020
- Moving to object oriented Ternary_model. Solutions agree. Tested for one set. · 4d5a29e2
  Lars Hubatsch authored 5 years ago
  
  4d5a29e2