Commits · fb9588a9a30324077730262bee219f623a06f6ab · hubatsch / Frap Theory · GitLab

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Aug 10, 2021
- plot_sim can now work with two species. · fb9588a9
  Lars Hubatsch authored 3 years ago
  
  fb9588a9
- Start working on Hammerhead/Ribozyme reaction. Seems to work in principle. · b047d291
  Lars Hubatsch authored 3 years ago
  
  b047d291
Aug 09, 2021
- Starting work on dip in mobility. Not finished. · 6680ed59
  Lars Hubatsch authored 3 years ago
  
  6680ed59
Mar 23, 2021
- Test jump length with tanh mobility. Slightly off. · b8721728
  Lars Hubatsch authored 4 years ago
  
  b8721728
Mar 14, 2021
- Introduce constant flux case with Dirichlet BC. Works in principle. · ae8fe0e3
  Lars Hubatsch authored 4 years ago
  
  ae8fe0e3
Feb 10, 2021
- Make mesh more precise close to zero to have good agreement with Stefano. · 1f13d183
  Lars Hubatsch authored 4 years ago
  
  1f13d183
Feb 04, 2021
- Fix two bugs in calculation of gamma0. · 7f3f984d
  Lars Hubatsch authored 4 years ago
  
  7f3f984d
- Better meshing around x0 for Gaussian initial condition. · 20bd2dbb
  Lars Hubatsch authored 4 years ago
  
  20bd2dbb
- Introduce possibility for constant D across entire domain. Not tested. · 0e5cf66e
  Lars Hubatsch authored 4 years ago
  
  0e5cf66e
Jan 15, 2021
- WIP: adapt for jumps in to in, out to out. · 0d3c09bc
  Lars Hubatsch authored 4 years ago
  
  0d3c09bc
Dec 08, 2020
- Introduce defaults parameters for pdepe. · a4d33682
  Lars Hubatsch authored 4 years ago
  
  a4d33682
- Delete obsolete spacing function. · 9d48a678
  Lars Hubatsch authored 4 years ago
  
  9d48a678
Nov 17, 2020
- Initial condition corrected to match proper client profile. · e3839e8a
  Lars Hubatsch authored 4 years ago
  
  e3839e8a
Nov 16, 2020
- Finer mesh around x0 also for client. · 6932c1f7
  Lars Hubatsch authored 4 years ago
  
  6932c1f7
Nov 11, 2020
- Real parameters can now be calculated also for square mobility. · b6cba63b
  Lars Hubatsch authored 4 years ago
  
  b6cba63b
Nov 09, 2020
- Enabling Stefanos mobility scaling. Not tested in Matlab. · f433ed84
  Lars Hubatsch authored 4 years ago
  
  f433ed84
Oct 29, 2020
- Adding x_scale param to plot_sim, to be able to plot in dimensional space. · 8ea4866f
  Lars Hubatsch authored 4 years ago
  
  8ea4866f
Oct 20, 2020
- Changing meshing for moving boundary. · 3847e7fe
  Lars Hubatsch authored 4 years ago
  
  3847e7fe
Oct 14, 2020
- Offset now relative to phi tot inside. · efdec659
  Lars Hubatsch authored 4 years ago
  
  efdec659
Oct 13, 2020
- Adding start parameter to plot_sim.m · a50c2302
  Lars Hubatsch authored 4 years ago
  
  a50c2302
Oct 07, 2020
- Introducing fractional bleach in model. · 8e7d1037
  Lars Hubatsch authored 4 years ago
  
  8e7d1037
Sep 29, 2020
- Comparison ML Python works. Spherical still off. Slab fine. · a9c0d6b5
  Lars Hubatsch authored 4 years ago
  
  a9c0d6b5
Sep 21, 2020
- create_mesh works for v==0. · 79a6dda5
  Lars Hubatsch authored 4 years ago
  
  79a6dda5
Sep 18, 2020
- WIP: Matlab jump length distribution moving boundary. · 1e4abf93
  Lars Hubatsch authored 4 years ago
  
  1e4abf93
Sep 15, 2020
- Updating Matlab plot for ternary FRAP sketch. · 753858e2
  Lars Hubatsch authored 4 years ago
  
  753858e2
Sep 09, 2020
- Not important to have same grid. · 376150bc
  Lars Hubatsch authored 4 years ago
  
  376150bc
- Reverting create_mesh to symmetric. · 36bff7ae
  Lars Hubatsch authored 4 years ago
  
  36bff7ae
- Doesn't work also with old asymmetric meshing. · 98b0496c
  Lars Hubatsch authored 4 years ago
  
  98b0496c
- Problem independent from boundary width and accuracy. · 42865e58
  Lars Hubatsch authored 4 years ago
  
  42865e58
Sep 08, 2020
- Normalization for plotting. Increase output flory_hugg_pde. · 91ae8735
  Lars Hubatsch authored 4 years ago
  
  91ae8735
- Fluxes can be mapped by stretching and scaling. · 45e9b8bb
  Lars Hubatsch authored 4 years ago
  
  45e9b8bb
- Flux and total intensity inside similar up to a factor. · 1885499d
  Lars Hubatsch authored 4 years ago
  
  1885499d
Aug 30, 2020
- Jump distribution work bidirectionally. · 5d47b16e
  Lars Hubatsch authored 4 years ago
  
  5d47b16e
Aug 27, 2020
- Fokker-Planck FRAP jump length works. · 08783414
  Lars Hubatsch authored 4 years ago
  
  08783414
Aug 24, 2020
- Minor changes to Ternary_model. · afb4be94
  Lars Hubatsch authored 4 years ago
  
  afb4be94
Aug 18, 2020
- Changed plotting. · ae58a15a
  Lars Hubatsch authored 4 years ago
  
  ae58a15a
Aug 10, 2020
- Adjusting to new input parameters. · eb7b7e85
  Lars Hubatsch authored 4 years ago
  
  eb7b7e85
Aug 05, 2020
- Adding normalization factors. Cleaning up. · 04f59817
  Lars Hubatsch authored 4 years ago
  
  04f59817
Aug 04, 2020
- Adding equilibrium initial condition, called phi_tot. · adb20417
  Lars Hubatsch authored 4 years ago
  
  adb20417
Jul 30, 2020
- Automatic distinction between client and constituent equations. · ad18b356
  Lars Hubatsch authored 4 years ago
  
  ad18b356