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  • 3D-two-matrices
  • EffectiveDrop
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Created with Raphaël 2.2.025Mar2423222117161514832122Feb212015Jan24Nov26Oct2019141314Sep31Aug271091Apr30Mar231914922Feb201413108754330Jan24191816158Dec227Nov18171611943229Oct2623222120191413729Sep2825242221181716159875331Aug302726252418121065431Jul30292221201918171614131279Jun22May2015121110328Apr272220161412118762127Mar26252423201917151412109625Feb241716141312111031Jan2015146330Dec1918328Nov2726251918NOW it works.calc_b_spherical addedfunction make_A_spherical added.1D analytical index issue solvedChanged second GP with D_in and D_out. Plot still to fixAdded half partitioning timeProblem in analytical (D_m,D_p inverted). Analytical outside fixed. Analytical inside wip.Introduced D_in D_out in solve_D. Matches analytical solution just if D_in=D_outIntroduce final time T as parameter.Change labels, timepoints, comment.Unify function argument order. Added doc strings.Comparison with Analytical solution works.Final interval now from 0 to 1.Smaller D gets rid of discontinuous boundary intensity increase.Comparison with Matlab numerics works.Different time steps work. alpha is now function.Creating matrix A is now a function make_A.Seems to work. Now try with larger time steps after initial equilibration.Small time step and setting one point right of boundary to 0 seems to help.Comparison with Matlab. Realised oscillation problem is in the initial conditions.Matrices for b and u are now output and plotted.Merge remote-tracking branch 'origin/EffectiveDrop' into EffectiveDropEffectiveDropEffectiveDropIntroduce solution arrayeff-Drop ghost points work above a certain number of cycleseff_Drop_DinDoutC.jl ghost points workingChange length to len.Remove factor 1/2 from alpha definition.eff_Drop_DinDoutC.jl added external GP, cut_ghost cuts external and boundary GP and returns X, U.Analytical solution starting inside and outside work.committing eff_Drop_DinDoutC.jl againRevert for Marta's code to work.Plotting optimized for interfacial resistance.Reinstate missing for.Simulation for nicer movie.Don't import Camera to avoid errors.Add .mov to .gitignore.Add Ribozyme figure (with data and Sim from Matlab).Changing ellipsoid (probably for plotting).Playing with interfacial resistance by changing gamma at boundary (Matlab).Playing with interfacial resistance at boundary, not working.