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Created with Raphaël 2.2.05Nov22Aug14Jun10765323May221686528Apr25242319171682127Mar2312Feb730Nov13223Sep227Aug26Nov17Aug8543224Jul2119141312111098764230Jun292523151325May20829Apr282721151187654131Mar302928252423222117161514832122Feb212015Jan24Nov26Oct2019141314Sep31Aug271091Apr30Mar231914922Feb201413108754330Jan24191816158Dec227Nov18171611943229Oct2623222120191413729Sep2825242221181716159875331Aug302726252418121065431Jul30292221201918171614131279Jun22May2015121110328Apr272220161412118762127Mar26252423201917151412109625Feb241716141312111031Jan2015146330Dec1918328Nov2726251918Correct and stratify plot_sim.Diffusion movie for Tony.Starting work on checking steady state.Swapping A and B, for consistency with reaction-terms in the draft.This is the case that should be close to what Stefano wants.Switching to Backwards Euler scheme for stability. This case here is specialCorrect typo in sign of omega, double check!Profiles for chemical reaction paper seems to work well. Both symmetricsystem seems to work, but is spookeyly symmetric.Chemical reactions work, but flat steady-state.Source/sink now works without reactions, but with phase separation.WIP: this has an interesting intermediate state, but crashes later.Clean up.For Tony/Frank meeting. Works with and without reaction.Streamlined SourceSinkExpression, changed parameters, this now works withThis seems to be close to a real steady state!Also seems to work with corrected concentration terms.Incorporate 1D mesh into 'working' chemical reaction case.Introduce 1D case (via GPT4o), I've found a steady-state with:Add chemical reactions. Increase time step. Add plotting.Source and sink work in ternary case! Now add chemical reactions andThis now seems to get close to a steady state for the simple FH.Working on boundary conditions. Potentially easier to use source/sink.Found parameters where opposing phase separation seems to work.Introduce proper mobilities. System phase separates, at least withIntroduce 2-component prototype, to figure out good parameter regime.Fixed bug in weak form!Coupling interactions also seems to work in principal!First coupling in entropic term. Needs IC adjustment, to fulfillTwo components without any coupling works in principle in square mesh.Interface resistance case now seems to work, still needs to be thoroughlyRevert "Precalculate prefactor in u_i_k. Not completely general yet."Generalise plotting.Update plotting.Generalize plotting to allow individual time points to be plotted.Precalculate prefactor in u_i_k. Not completely general yet.k<0 (no resistance) seems to work!Fix typo.Initial conditions: still FRAP, but not bleaching boundary. Temp!Rewrite lu decomp.
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