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Created with Raphaël 2.2.017Mar161514832122Feb212015Jan24Nov26Oct2019141314Sep31Aug271091Apr30Mar231914922Feb201413108754330Jan24191816158Dec227Nov18171611943229Oct2623222120191413729Sep2825242221181716159875331Aug302726252418121065431Jul30292221201918171614131279Jun22May2015121110328Apr272220161412118762127Mar26252423201917151412109625Feb241716141312111031Jan2015146330Dec1918328Nov2726251918Seems to work. Now try with larger time steps after initial equilibration.Small time step and setting one point right of boundary to 0 seems to help.Comparison with Matlab. Realised oscillation problem is in the initial conditions.Matrices for b and u are now output and plotted.Merge remote-tracking branch 'origin/EffectiveDrop' into EffectiveDropEffectiveDropEffectiveDropIntroduce solution arrayeff-Drop ghost points work above a certain number of cycleseff_Drop_DinDoutC.jl ghost points workingChange length to len.Remove factor 1/2 from alpha definition.eff_Drop_DinDoutC.jl added external GP, cut_ghost cuts external and boundary GP and returns X, U.Analytical solution starting inside and outside work.committing eff_Drop_DinDoutC.jl againRevert for Marta's code to work.Plotting optimized for interfacial resistance.Reinstate missing for.Simulation for nicer movie.Don't import Camera to avoid errors.Add .mov to .gitignore.Add Ribozyme figure (with data and Sim from Matlab).Changing ellipsoid (probably for plotting).Playing with interfacial resistance by changing gamma at boundary (Matlab).Playing with interfacial resistance at boundary, not working.Change plotting presets.analytical solution workinganalytical solution wiplength(x) substituted with size(x)[1] because of type(collect(LinRange))included cut_ghost function, independent internal and external grid spacing commented out: first check solution and solve ghost pointsDin, Dout added to the model in separate file, added function compute alphaGraphs working!commit cleaned notebookAnalyse half times:partitioning corrected.Analyse half times. WIP: partitioning.Works!Functions apparently run much faster in Julia than scripts!Fixed Normalization (I). Cosmetics.First time step roughly works.Starting work on effective droplet model in Julia.Introduced a dip in phi_tot close to boundary. Commented out.New attempt at effective droplet model in Matlab. Still not working, but