Commits · master · tothpetroczylab / SHARK · GitLab

Snippets Groups Projects

Apr 17, 2025
- Changed type-hints Mapping to Dict · 2c91ef9d
  Soumyadeep Ghosh authored 2 days ago and Soumyadeep Ghosh committed 2 days ago
  
  2c91ef9d
Mar 04, 2025
- changed unit tests · 2aae64ed
  chow authored 1 month ago
  
  2aae64ed
- changed google function name · 793efc54
  chow authored 1 month ago
  
  793efc54
- remove alf_scoring files · 88298d4d
  chow authored 1 month ago
  
  88298d4d
Feb 22, 2025
- remove requirement for alfpy package · d66d8c60
  chow authored 1 month ago
  
  d66d8c60
- Added docstrings for Normalised Google Distance functions · 5ea76e32
  chow authored 1 month ago
  
  5ea76e32
Feb 21, 2025
- Version bump · b3a8bc8d
  chow authored 1 month ago
  
  b3a8bc8d
- replace google score with own function in notebook · 86d41617
  chow authored 1 month ago
  
  86d41617
- replace google score with own function · ba8fd092
  chow authored 1 month ago
  
  ba8fd092
- appended option to run Google Score · 6497bc6d
  chow authored 1 month ago
  
  6497bc6d
- implement NGD ourselves · 3197b8c1
  chow authored 1 month ago
  
  3197b8c1
Jan 28, 2025
- docs,fix: Replaced real path with template. · 2b8759de
  Maxim Scheremetjew authored 2 months ago
  
  View commits for tag 2.0.3 2.0.3
  
  2b8759de
- chore: Bump version from 2.0.2 to 2.0.3. · 5d01c51c
  Maxim Scheremetjew authored 2 months ago
  
  5d01c51c
Jan 27, 2025
- tests: Implemented e2e tests for the capture tool. · ef818b6a
  Maxim Scheremetjew authored 2 months ago
  
  ef818b6a
- docs,fix: Rolled back to bio_shark module instead of src. · 9062d17a
  Maxim Scheremetjew authored 2 months ago
  
  9062d17a
Jan 24, 2025
- SHARK-capture extension protocol can now be run from command line · 51577aa8
  chow authored 2 months ago
  
  51577aa8
- README update to show how to use shark-capture extension protocol on results · 1cf134be
  chow authored 2 months ago
  
  1cf134be
- enforce partial files to be read in order · f60d2135
  chow authored 2 months ago
  
  f60d2135
Jan 23, 2025
- Applied final fixes to the finalize_sharkcapture script. · c4b26741
  Maxim Scheremetjew authored 2 months ago
  
  c4b26741
Jan 22, 2025
- feat: Made chunk_size configurable. · 5065ca26
  Maxim Scheremetjew authored 2 months ago
  
  5065ca26
- READme change to clarifying strict folder naming · 8cece1f8
  chow authored 2 months ago
  
  8cece1f8
- added minor comment for clarification · be7b0572
  chow authored 2 months ago
  
  be7b0572
- added parameter to finalize_sharkcapture pipeline to locate folder of partial hadamards · 8d2b5353
  chow authored 2 months ago
  
  8d2b5353
- docs: Improved documentation for parallelisation of the SHARK-capture tool. · 19fad14c
  Maxim Scheremetjew authored 2 months ago
  
  19fad14c
Jan 21, 2025
- release: Bump version to 2.0.2. · a8cab5ec
  Maxim Scheremetjew authored 2 months ago
  
  a8cab5ec
- docs: Few corrections regarding SHARK-capture. · a6261a25
  Maxim Scheremetjew authored 2 months ago
  
  a6261a25
Nov 14, 2024
- docs: Added content table. · 2d9d2021
  Maxim Scheremetjew authored 5 months ago
  
  2d9d2021
- chore: Updated project meta data. Replaced vulnerable version of the requests package. · 13599075
  Maxim Scheremetjew authored 5 months ago
  
  13599075
- docs: More changes to the badges. · a9f7a1cf
  Maxim Scheremetjew authored 5 months ago
  
  a9f7a1cf
- docs: Added badges. · b6953607
  Maxim Scheremetjew authored 5 months ago
  
  b6953607
- docs: Applied a few more corrections. · d71ded30
  Maxim Scheremetjew authored 5 months ago
  
  d71ded30
Nov 13, 2024
- docs: Minor style formatting changes. · 25d5bcfc
  Maxim Scheremetjew authored 5 months ago
  
  View commits for tag 2.0.1 2.0.1
  
  25d5bcfc
- docs: Made it clear that capture is not available in PyPI yet. · 92931aed
  Maxim Scheremetjew authored 5 months ago
  
  92931aed
- docs: Delete "Use capture as imported functions" section. · 5b88b871
  Maxim Scheremetjew authored 5 months ago
  
  5b88b871
- chore: Added combined DIVE and CAPTURE logo. · a0bae27f
  Maxim Scheremetjew authored 5 months ago
  
  a0bae27f
- fix, docs: Applied minor corrections to the README file. · b3aebde8
  Maxim Scheremetjew authored 5 months ago
  
  b3aebde8
- try: Changed Python requirements from >=3.9,<3.12 to >=3.8,<3.13. · 2f299fee
  Maxim Scheremetjew authored 5 months ago
  
  2f299fee
- Merge branch 'master' of https://git.mpi-cbg.de/tothpetroczylab/shark · 6bfc3ed6
  Maxim Scheremetjew authored 5 months ago
  
  Synced fork from upstream.
  6bfc3ed6
- changed tool description · 473e601d
  chow authored 5 months ago and Maxim Scheremetjew committed 5 months ago
  
  473e601d
- chore,ci: Changed Python support to >=3.8,<3.13 · d03fe15e
  Maxim Scheremetjew authored 5 months ago
  
  d03fe15e