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This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.

Segmentation of the basal cell-matrix contact sites on laminin structure

Project to quantify and measure orientation of network branches in regards to Ch iMap

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

A test repository for teaching

Particle filter tracking toolkit/framework for the popular free image processing software ImageJ.

Live cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities

PDE inference from limited spatio-temporal data

Complementary information concerning the article: "The novel Rab5 effector FERRY links the early endosome with the translation machinery"

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

A web service for calculating the Levenshtein distance between two sequences

Theory analysis and code for studying Drosophila wing disc eversion