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parallel parameter homotopy through bertini

Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.

multiparameter persistence

pCMALib: a parallel FORTRAN 90 library for CMA-ES

drop-in header-only C++ library to detect hardware capabilities at runtime and at compiletime

MSS trajectory analysis

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

Bertini 2.0: The redevelopment of Bertini in C++.

Data and code for "impossible ecologies" paper

Silviana's development fork of Bertini 2

PPM_RC: Distributed-Memory Parallel Image Segmentation

openfpm_pdata