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Docker container for single-cell-RNAseq analysis

useful functionality for image-, data-analysis and classification of stembryos

This repository contains the image analysis pipelines for bile canaliculi analysis and mesenchyme counting associated with the paper "Mouse liver assembloids model periportal architecture and biliary fibrosis"

Repository containing the scripts used in Iglesias-Artola et al 2024. Quantitative imaging of species-specific lipid transport in mammalian cells

Python package of the deTEL translation error detection pipeline from mass-spectrometry data

A web service for calculating the Levenshtein distance between two sequences

Theory analysis and code for studying Drosophila wing disc eversion

New analyses for the "Navigating Uncertainty in Encoded Decision-Space" project. Analysis for both "Fruit Task" and "Hexagons Task."

Similarity/Homology Assessment by Relating K-mers

This software package implements the identification of robust topological defects.

Improving contrast in confocal data by degrading image with model of light scattering

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"