Commit 18ed80bc authored by gonciarz's avatar gonciarz
Browse files

Version 1.0.20

parent cc817be4
......@@ -2,6 +2,9 @@
* 1.0.20
- ParticleTracker plugin now can use GPU acceleartion provided by CLIJ2
* 1.0.19
- Discrete region sampling (DRS) is finally available in official release
......@@ -22,7 +22,7 @@ copyright = '2020, MOSAIC Group, Sbalzarini Lab,'
author = 'MOSAIC Group, Sbalzarini Lab'
# The full version, including alpha/beta/rc tags
release = '1.0.19'
release = '1.0.20'
# -- General configuration ---------------------------------------------------
......@@ -48,6 +48,7 @@ The dialog showing now has 2 parts: Particle Detection and Particle Linking.
The parameters relevant for detection are:
* **Radius**: Approximate radius of the particles in the images in units of pixels. The value should be slightly larger than the visible particle radius, but smaller than the smallest inter-particle separation.
* **Accelerate with CLIJ2 (experimental)**: Use CLIJ2 to utilize GPU for detection of particles. Especially good for large radius (>10) setting. IMPORTANT: This option is visible only when CLIJ2 is installed (enable 'clij' and 'clij2' in update sites of your Fiji to download and install it).
* **Cutoff**: The score cut-off for the non-particle discrimination
* **Per/Abs**: The percentile (r) (or absolute intensity value) that determines which bright pixels are accepted as Particles. All local maxima in the upper rth percentile of the image intensity distribution ( or absolute intensity value ) are considered candidate Particles. Unit: percent (%) (or absolute intensity value)
* **Absolute**: when enable it read the Per/Abs parameter as absolute intensity value
......@@ -7,7 +7,7 @@
<description>Package contains image processing algorithms developed in MOSAIC Group</description>
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