Commits · cd68fe727a62cfae2510fc3b157f87269a354b56 · bioinfo / ngs_tools

May 21, 2015
- reenabled job submission for cuffdiff · cd68fe72
  Holger Brandl authored 9 years ago
  
  cd68fe72
- improved excel example · dc6b99fe
  Holger Brandl authored 9 years ago
  
  dc6b99fe
- adjusted to use new .logs directory · 37ca0314
  Holger Brandl authored 9 years ago
  
  37ca0314
- renamed DGE_HOME to NGS_TOOLS · 129c852e
  Holger Brandl authored 9 years ago
  
  129c852e
- improved dge templates · 6dc2c135
  Holger Brandl authored 9 years ago
  
  6dc2c135
May 20, 2015
- improved dge template · c3958cf3
  Holger Brandl authored 9 years ago
  
  c3958cf3
- added more sheet parser examples · 8e2316e6
  Holger Brandl authored 9 years ago
  
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  8e2316e6
- improved master template · 72a97eec
  Holger Brandl authored 9 years ago
  
  72a97eec
- cont. igv session creator · c074b546
  Holger Brandl authored 9 years ago
  
  c074b546
May 19, 2015
- cont. track ranges · d297c25f
  Holger Brandl authored 9 years ago
  
  d297c25f
May 12, 2015
- changed to use pandoc syntax · 32c4e2bd
  Holger Brandl authored 9 years ago
  
  32c4e2bd
- added readme · 8bd7f77f
  Holger Brandl authored 9 years ago
  
  8bd7f77f
- added readme · 46138fe5
  Holger Brandl authored 9 years ago
  
  46138fe5
- added readme · 06edce38
  Holger Brandl authored 9 years ago
  
  06edce38
- started igv range tool · 645cf947
  Holger Brandl authored 9 years ago
  
  645cf947
Apr 30, 2015
- replaced dropbox links to core_* with versioned github links · 6f0748b9
  Holger Brandl authored 9 years ago
  
  6f0748b9
Apr 29, 2015
- changed to use default igv port · 3ddf07d2
  Holger Brandl authored 9 years ago
  
  3ddf07d2
Apr 28, 2015
- inc R datautils version to 1.9; better counting · 8fc29827
  Holger Brandl authored 9 years ago
  
  8fc29827
- synced chipseq workflows · dd2b5932
  Holger Brandl authored 9 years ago
  
  dd2b5932
Apr 27, 2015
- Merge branch 'master' of git-srv1:/local/git/bioinformatics · 380426d4
  Holger Brandl authored 9 years ago
  
  380426d4
- add count utilities; and ref workflow for old counting approach · a1d928c9
  Holger Brandl authored 9 years ago
  
  a1d928c9
Apr 23, 2015
- Merge branch 'master' of ssh://git-srv1:/local/git/bioinformatics · 8730a77e
  Holger Brandl authored 9 years ago
  
  8730a77e
- tooltips for pathways · 0669bc52
  Holger Brandl authored 9 years ago
  
  0669bc52
- create local copy of spinnable script for better decoupling of analysis · 08c29098
  Holger Brandl authored 9 years ago
  
  08c29098
Apr 16, 2015
- cometics · 16a9b342
  Holger Brandl authored 9 years ago
  
  16a9b342
- more doc · e0ee82a7
  Holger Brandl authored 9 years ago
  
  e0ee82a7
Apr 09, 2015
- fixed: duplicated pathways · a1e8e701
  Holger Brandl authored 9 years ago
  
  a1e8e701
Apr 08, 2015
- better volcano plots · 8da587a3
  Holger Brandl authored 9 years ago
  
  8da587a3
- cosmetics · ae7d391d
  Holger Brandl authored 9 years ago
  
  ae7d391d
- new report and timepoint clusterings · 6bc2fb96
  Holger Brandl authored 9 years ago
  
  6bc2fb96
- cont better dge report · 2bc38c7e
  Holger Brandl authored 9 years ago
  
  2bc38c7e
Apr 07, 2015
- revised dge report · f9f0b9cd
  Holger Brandl authored 9 years ago
  
  f9f0b9cd
- started improved dge report · bfbb3ba6
  Holger Brandl authored 9 years ago
  
  bfbb3ba6
- cint arhgap11ab algn comparison · 79277551
  Holger Brandl authored 9 years ago
  
  79277551
Apr 01, 2015
- synced cs workflows · 32c6ced8
  Holger Brandl authored 9 years ago
  
  32c6ced8
- more logging · f62254bb
  Holger Brandl authored 9 years ago
  
  f62254bb
- cont. cs analysis · b5c44e2f
  Holger Brandl authored 9 years ago
  
  b5c44e2f
- bam resampling for better plot normalization · c20a576f
  Holger Brandl authored 9 years ago
  
  c20a576f
- cont 11b analysis · c31dbd09
  Holger Brandl authored 9 years ago
  
  c31dbd09
Mar 31, 2015
- started project · a6c0218c
  Holger Brandl authored 9 years ago
  
  a6c0218c