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Similarity/Homology Assessment by Relating K-mers

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

Jenkins pipelines

This software package implements the identification of robust topological defects.

Improving contrast in confocal data by degrading image with model of light scattering

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.

Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"

Segmentation of the basal cell-matrix contact sites on laminin structure

Project to quantify and measure orientation of network branches in regards to Ch iMap

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)