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Bifunctional Monosaccharides Preferentially Localize to Nuclear Subcompartments
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PDE inference from limited spatio-temporal data
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Script for publication - Matrix topology guides collective cell migration in vivo
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Hexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.
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Code accompanying "Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks", Maddu et al., 2021
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This repository is all about simulating flow driven pruning in biological flow networks.
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This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.
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hyrdrodynamics methods for kirchhoff graphs
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Official MOSAIC Group software repository.
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Scenery - Virtual Reality and Augmented Reality framework
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Interaction Analysis Toolbox for MATLAB
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Region Competition algorithm implemented as an ITK filter (C++).
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A MATLAB implementation of the split-Bregman algorithm for image segmentation
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MATLAB Toolbox for cell-outline segmentation in phase-contrast images
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MATLAB code for deconvolving snakes
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MATLAB implementation of image naturalization