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Completly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files

Henricks script as Python

PDE inference from limited spatio-temporal data

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Supplementary Jupyter notebook to our article "Lgr5+ stem/progenitor cells reside at the apex of the embryonic hepatoblast pool"

Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.

This software package implements the identification of robust topological defects.

Similarity/Homology Assessment by Relating K-mers