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Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)
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MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.
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Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"
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Segmentation of the basal cell-matrix contact sites on laminin structure
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Script for publication - Matrix topology guides collective cell migration in vivo
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Little tiny model of Ath5-Ptf1a interactions in fate decisions in the embryonic zebrafish retina.
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hyrdrodynamics methods for kirchhoff graphs
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This repository is all about simulating flow driven pruning in biological flow networks.
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class definitions and methods for kirchhoff graphs
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Code used to prepare events plots for controls and morpholinos experiments for lineage analysis