GitLab

Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.

repo to contain example notebooks to run DeepContrast

A web service for calculating the Levenshtein distance between two sequences

Bifunctional Monosaccharides Preferentially Localize to Nuclear Subcompartments

Official MOSAIC Group software repository.

Improving contrast in confocal data by degrading image with model of light scattering

This software package implements the identification of robust topological defects.

Variant Effect Predictor (VEP) for missense variants in clinically actionable genes (ACMG SF v2.0).

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.