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Script for publication - Matrix topology guides collective cell migration in vivo
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Jenkins pipelines
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Code accompanying "Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks", Maddu et al., 2021
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This repository contains source codes and notebook demos for trainin STENCIL-NET.
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Scenery - Virtual Reality and Augmented Reality framework
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Small scripts and bits for data processing interoperability with the cluster
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This repository is all about simulating flow driven pruning in biological flow networks.
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hyrdrodynamics methods for kirchhoff graphs
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This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.
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Interaction Analysis Toolbox for MATLAB
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Region Competition algorithm implemented as an ITK filter (C++).
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A MATLAB implementation of the split-Bregman algorithm for image segmentation
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MATLAB Toolbox for cell-outline segmentation in phase-contrast images