GitLab

A collection of tools to process and manipulate high-throughput sequencing data

Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)

collections of hackyhour examples and documentation

openfpm_pdata

Hexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.

This repository is all about simulating flow driven pruning in biological flow networks.

Filter .fasta file by accession Number

drop-in header-only C++ library to detect hardware capabilities at runtime and at compiletime

Analysis of actomyosin dynamics at local and tissue scales in cultured Drosophila egg chambers. Ivana Viktorinová, Robert Haase, Tobias Pietzsch, Ian Henry and Pavel Tomancak

This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.

MATLAB implementation of image naturalization

hyrdrodynamics methods for kirchhoff graphs

MATLAB Toolbox for cell-outline segmentation in phase-contrast images