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A collection of tools to process and manipulate high-throughput sequencing data
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Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)
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collections of hackyhour examples and documentation
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Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.
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Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"
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Variant Effect Predictor (VEP) for missense variants in clinically actionable genes (ACMG SF v2.0).
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Documentations for CD-CODE project
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Improving contrast in confocal data by degrading image with model of light scattering
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Analysis of ARE in liver tissue. with Julien Delpierre
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Complementary information concerning the article: "The novel Rab5 effector FERRY links the early endosome with the translation machinery"
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Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.
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MotionTracking project to Analyze Hepatocyte Cages.
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