GitLab

A collection of tools to process and manipulate high-throughput sequencing data

Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)

collections of hackyhour examples and documentation

Variant Effect Predictor (VEP) for missense variants in clinically actionable genes (ACMG SF v2.0).

Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.

Complementary information concerning the article: "The novel Rab5 effector FERRY links the early endosome with the translation machinery"

Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"

Web frontend (VueJs) and CMS (Strapi)

MotionTracking project to Analyze Hepatocyte Cages.

CrowDsourcing COndensate Database and Encyclopedia

Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"

Backend APIs (Flask) exposing data from database in RESTful format

Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)

MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.