Explore projects
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hidra fork, intended to exist until desy's hidra goes full open source on github or similar
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Slicing lc ms data into time ... slices, to run lipidxplorer on the slices
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Scientific Computing / Viktorinova_et_al_Actomyosin_dynamics
Creative Commons Attribution 4.0 InternationalAnalysis of actomyosin dynamics at local and tissue scales in cultured Drosophila egg chambers. Ivana Viktorinová, Robert Haase, Tobias Pietzsch, Ian Henry and Pavel Tomancak
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steinbac / ngs_tools
BSD 3-Clause "New" or "Revised" LicenseA collection of tools to process and manipulate high-throughput sequencing data
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rhaase / lecture_bioimage_analysis_with_fiji
BSD 3-Clause "New" or "Revised" LicenseUpdated -
steinbac / compass-github-pull
BSD 3-Clause "New" or "Revised" Licensedrop-in header-only C++ library to detect hardware capabilities at runtime and at compiletime
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tomancaklab / ellipsoid-projection
BSD 2-Clause "Simplified" LicensePlugin to fit and unwrap ellipsoid surfaces
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Scientific Computing / Kalebic_et_al_progenitors_processes_analysis
BSD 3-Clause "New" or "Revised" LicenseComplementary information to the Progenitors Processes Analysis (PPA) script described in the paper "Kalebic et al, Neocortical expansion due to increased proliferation of basal progenitors is linked to changes in their morphology".
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Complementary information concerning the article: "A 3D system to model human pancreas development and its reference single cell transcriptome atlas reveal signaling pathways required for progenitor expansion"
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labShevchenko / PeakStrainer
MIT LicenseUpdated -
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Scientific Computing / bioimage_team / IACourse_2020-12
Creative Commons Attribution Non Commercial 4.0 International3day Image analysis course given externally in 2020-12.
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Improving contrast in confocal data by degrading image with model of light scattering
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Sbalzarini Lab / Software / Math / minter
MIT LicenseUpdated