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Similarity/Homology Assessment by Relating K-mers

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"

Completly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files

Backend APIs (Flask) exposing data from database in RESTful format

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.

collections of hackyhour examples and documentation

resolution slope calculator for Lipid xplorer

Theory analysis and code for studying Drosophila wing disc eversion

useful functionality for image-, data-analysis and classification of stembryos

This repository contains source codes and notebook demos for trainin STENCIL-NET.

Live cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities

Complementary information to the image analysis script described in the paper "Salamander Eci: an optical clearing protocol for the three-dimensional exploration of regeneration".

Library for producing and processing on the Adaptive Particle Representation (APR)