Explore projects

Jenkins pipelines

Similarity/Homology Assessment by Relating K-mers

New analyses for the "Navigating Uncertainty in Encoded Decision-Space" project. Analysis for both "Fruit Task" and "Hexagons Task."

Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.

A collection of tools to process and manipulate high-throughput sequencing data

MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.

Python package of the deTEL translation error detection pipeline from mass-spectrometry data

Repository containing the scripts used in Iglesias-Artola et al 2024. Quantitative imaging of species-specific lipid transport in mammalian cells

gap closing pipeline based on gcpp

polishing pipelines

Complementary information concerning the article "Mutations in the Drosophila splicing regulator Prp31 as a model for Retinitis pigmentosa 11"

Complementary information concerning the article "Evolution and cell-type specificity of human-specific genes preferentially expressed in progenitors of fetal neocortex"