Explore projects

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

R utilities for data analysis and bioinformatics

Complementary information concerning the article: "A 3D system to model human pancreas development and its reference single cell transcriptome atlas reveal signaling pathways required for progenitor expansion"

Complementary information concerning the article: "The novel Rab5 effector FERRY links the early endosome with the translation machinery"

Jenkins pipelines

Hexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.

Scenery - Virtual Reality and Augmented Reality framework

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

PPM_RC: Distributed-Memory Parallel Image Segmentation

Small scripts and bits for data processing interoperability with the cluster

patches to vfb-run to allow multiple xvfb processes on one machine