Explore projects
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rhaase / lecture_applied_bioimage_analysis
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
dibrov / chromosome_size
MIT LicenseUpdated -
rhaase / ABIA_Prague_2019
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
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walker / NNet_simple
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Scientific Computing / bioimage_team / stardist_nnet_explore
BSD 3-Clause "New" or "Revised" LicenseUpdated -
rhaase / int_sys_2020
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
mirandaa / LipidXplorer2
BSD 3-Clause "New" or "Revised" LicenseCompletly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files
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This repository contains source codes and notebook demos for trainin STENCIL-NET.
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Scientific Computing / bioimage_team / unet2d_base
BSD 3-Clause "New" or "Revised" LicenseImplementation of 2D unet. Use as base for user projects.
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walker / cellpose_explore
BSD 3-Clause "New" or "Revised" LicenseExploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation
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kramer / cycle-coalescence-algorithm
MIT LicenseThis is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.
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Code accompanying "Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks", Maddu et al., 2021
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krishna / Laminin_network
Creative Commons Zero v1.0 UniversalHexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.
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PDE inference from limited spatio-temporal data
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