Explore projects
-
-
Updated
-
PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.
Updated -
Updated
-
Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.
Updated -
Theory analysis and code for studying Drosophila wing disc eversion
Updated -
Implementation of 2D unet. Use as base for user projects.
Updated -
Completly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files
Updated -
Improving contrast in confocal data by degrading image with model of light scattering
Updated -
This software package implements the identification of robust topological defects.
Updated -
Updated
-
Updated
-
Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"
Updated -
This repository is all about simulating flow driven pruning in biological flow networks.
Updated -
-