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dibrov / chromosome_size
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tothpetroczylab / Picnic
BSD 3-Clause "New" or "Revised" LicensePICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.
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mirandaa / LipidXplorer2
BSD 3-Clause "New" or "Revised" LicenseCompletly reimplmented Lipidxplorer, with adaptation layer to read lipidxplorer1 files
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Mateus_Group / Guanine_crystal_analysis_APOC
BSD 3-Clause "New" or "Revised" LicenseRepository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"
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PDE inference from limited spatio-temporal data
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Improving contrast in confocal data by degrading image with model of light scattering
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This repository is all about simulating flow driven pruning in biological flow networks.
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This software package implements the identification of robust topological defects.
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Sbalzarini Lab / Software / Parallel Computing / OpenFPM / openfpm
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Scientific Computing / bioimage_team / unet2d_base
BSD 3-Clause "New" or "Revised" LicenseImplementation of 2D unet. Use as base for user projects.
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rhaase / lecture_applied_bioimage_analysis
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
rhaase / ABIA_Prague_2019
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
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walker / cellpose_explore
BSD 3-Clause "New" or "Revised" LicenseExploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation
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kramer / cycle-coalescence-algorithm
MIT LicenseThis is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.
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