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Material for an IJ macro course.

MATLAB implementation of image naturalization

Data and code for "impossible ecologies" paper

Simulation of virus transmission between cells

Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.

This is a code-repository for the image-, sequencing and data-analysis performed for the manuscript: Integrated Molecular-Phenotypic Profiling Reveals Tuneable Modulators of Morphological Variation in Stembryos" authored by: Alba Villaronga Luque et al.

Interaction Analysis Toolbox for MATLAB

Image analysis course (20h): Concepts and hands-on with Fiji and Ilastik.

Image analysis course (4.5h): Concepts and hands-on with Fiji.

Code accompanying "Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks", Maddu et al., 2021

Complementary information to the Progenitors Processes Analysis (PPA) script described in the paper "Kalebic et al, Neocortical expansion due to increased proliferation of basal progenitors is linked to changes in their morphology".

class definitions and methods for kirchhoff graphs

hyrdrodynamics methods for kirchhoff graphs

Hexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.