Commits · 3df117aeb45d7fb47efa2ae44796a50a2a3de469 · bioinfo / ngs_tools

Jul 28, 2016
- added tx alignments · 3df117ae
  Holger Brandl authored 8 years ago
  
  3df117ae
Jul 08, 2016
- fixed to work with latest bioc-dev · e6a3cb0b
  Holger Brandl authored 8 years ago
  
  e6a3cb0b
Jul 07, 2016
- cont gsea wrapper · 7abd76a4
  Holger Brandl authored 8 years ago
  
  7abd76a4
Jul 06, 2016
- moved utility cp functions into commons · 46d37f8c
  Holger Brandl authored 8 years ago
  
  46d37f8c
- cosmetics · bfd2dad5
  Holger Brandl authored 8 years ago
  
  bfd2dad5
- started gsea enrichment tool · 2d1b1fe3
  Holger Brandl authored 8 years ago
  
  2d1b1fe3
Jul 05, 2016
- finished basic results integration · d2e5dec2
  Holger Brandl authored 8 years ago
  
  d2e5dec2
- ported fc analysis to h3ha data · 89a8034b
  Holger Brandl authored 8 years ago
  
  89a8034b
- modernized chipseq utilities · 3499f2a6
  Holger Brandl authored 8 years ago
  
  3499f2a6
Jul 01, 2016
- fixed partition name · 3c31df51
  Holger Brandl authored 8 years ago
  
  3c31df51
- added bedtools to PATH · c0829296
  Holger Brandl authored 8 years ago
  
  c0829296
Jun 24, 2016
- fixed package loading for R3.3 · 68a73286
  Holger Brandl authored 8 years ago
  
  68a73286
Jun 15, 2016
- cosmetics · 05130a0f
  Holger Brandl authored 8 years ago
  
  05130a0f
Jun 03, 2016
- fixed for pe alignments · 7bd3e86b
  Holger Brandl authored 8 years ago
  
  7bd3e86b
Jun 02, 2016
- continued read mapping · db33dee0
  Holger Brandl authored 8 years ago
  
  db33dee0
Jun 01, 2016
- Merge branch 'master' of git.mpi-cbg.de:bioinfo/ngs_tools · 77f8dab4
  Holger Brandl authored 8 years ago
  
  77f8dab4
- added bioinfo-srv1 compatibility · 5b43501d
  Holger Brandl authored 8 years ago
  
  5b43501d
May 30, 2016
- added iml files to ignore list · bfd3043e
  Holger Brandl authored 8 years ago
  
  bfd3043e
- avoid that _2.fastqs are mapping · 3ce7f8c4
  Holger Brandl authored 8 years ago
  
  3ce7f8c4
May 26, 2016
- use abs.max for gene aggregation · 49891eaf
  Holger Brandl authored 8 years ago
  
  49891eaf
May 25, 2016
- switched back to furiosa config · b31b589b
  Holger Brandl authored 8 years ago
  
  b31b589b
- Merge branch 'master' of git.mpi-cbg.de:bioinfo/ngs_tools · 5e202da3
  Holger Brandl authored 8 years ago
  
  5e202da3
- fixed madmax config · ee236d89
  Holger Brandl authored 8 years ago
  
  ee236d89
May 20, 2016
- expose q-cutoff as parameter · 070c2f76
  Holger Brandl authored 8 years ago
  
  070c2f76
May 19, 2016
- cosmetics · 87cd7170
  Holger Brandl authored 8 years ago
  
  87cd7170
- Merge remote-tracking branch 'remotes/origin/madmax' · 2faeefc3
  Holger Brandl authored 8 years ago
  
  2faeefc3
May 17, 2016
- disabled saving of plotdata · fc573a87
  Holger Brandl authored 8 years ago
  
  fc573a87
- cosmetics · 92a54c21
  Holger Brandl authored 8 years ago
  
  92a54c21
May 13, 2016
- deseq workflow cosmetics · aea6b362
  Holger Brandl authored 8 years ago
  
  aea6b362
May 12, 2016
- cont mf-deseq · 5b9dc042
  Holger Brandl authored 8 years ago
  
  5b9dc042
- cont furiosa porting of rna-seq workflow · 22279176
  Holger Brandl authored 8 years ago
  
  22279176
- clean up and tool deprecation · 10fdfc65
  Holger Brandl authored 8 years ago
  
  10fdfc65
- improved deseq reporting · a4056b0f
  Holger Brandl authored 8 years ago
  
  a4056b0f
May 11, 2016
- cont. mf deseq · b485c9e1
  Holger Brandl authored 8 years ago
  
  b485c9e1
- cont mf deseq · ffc16c40
  Holger Brandl authored 8 years ago
  
  ffc16c40
May 10, 2016
- started new mf deseq · 2d9c0213
  Holger Brandl authored 8 years ago
  
  2d9c0213
- fixed dependencies · 089f52cb
  Holger Brandl authored 8 years ago
  
  089f52cb
- Merge remote-tracking branch 'remotes/origin/master' into madmax · 68beea46
  Holger Brandl authored 8 years ago
  
  68beea46
May 09, 2016
- add fpkm export to featcounts_deseq · d3488019
  Holger Brandl authored 8 years ago
  
  d3488019
May 04, 2016
- fixed typo in cleanup section · 398c04b4
  Holger Brandl authored 8 years ago
  
  398c04b4