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This repository is all about simulating flow driven pruning in biological flow networks.
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Scientific Computing / Kalebic_et_al_progenitors_processes_analysis
BSD 3-Clause "New" or "Revised" LicenseComplementary information to the Progenitors Processes Analysis (PPA) script described in the paper "Kalebic et al, Neocortical expansion due to increased proliferation of basal progenitors is linked to changes in their morphology".
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MATLAB toolbox for particle tracking
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bioinfo / datautils
BSD 2-Clause "Simplified" LicenseR utilities for data analysis and bioinformatics
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kramer / cycle-coalescence-algorithm
MIT LicenseThis is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.
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Scientific Computing / Soans_et_al_opticalcup_surface
BSD 3-Clause "New" or "Revised" LicenseScript for publication - Matrix topology guides collective cell migration in vivo
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steinbac / gearshifft_deprecated
Apache License 2.0Updated -
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This repository contains source codes and notebook demos for trainin STENCIL-NET.
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