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Scientific Computing / bioimage_team / Intro_ImageAnalysis_2021-07
Creative Commons Attribution Non Commercial 4.0 InternationalImage analysis course (4.5h): Concepts and hands-on with Fiji.
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Analysis of ARE in liver tissue. with Julien Delpierre
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Variant Effect Predictor (VEP) for missense variants in clinically actionable genes (ACMG SF v2.0).
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Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.
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rhaase / int_sys_2020
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
This software package implements the identification of robust topological defects.
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Implementation of Gaussian Next Subvolume Method (GNSM), which generates trajectories for Gaussian Reaction Diffusion Master Equation (GRDME)
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infrastructure / grails-plugin-jmesa
BSD 3-Clause "New" or "Revised" LicenseUpdated -
BioImage Informatics / SkeletonAnalysis
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Brownian dynamics simulation of cross-linked filament bundles
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This repository is all about simulating flow driven pruning in biological flow networks.
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Scientific Computing / Kalebic_et_al_progenitors_processes_analysis
BSD 3-Clause "New" or "Revised" LicenseComplementary information to the Progenitors Processes Analysis (PPA) script described in the paper "Kalebic et al, Neocortical expansion due to increased proliferation of basal progenitors is linked to changes in their morphology".
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bioinfo / datautils
BSD 2-Clause "Simplified" LicenseR utilities for data analysis and bioinformatics
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