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Sbalzarini Lab / Software / Parallel Computing / OpenFPM / openfpm
BSD 3-Clause "New" or "Revised" LicenseUpdated -
krishna / WDeversion_theory
MIT LicenseTheory analysis and code for studying Drosophila wing disc eversion
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hidra fork, intended to exist until desy's hidra goes full open source on github or similar
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MATLAB code for deconvolving snakes
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pSSAlib: Stochastic chemical network and reaction-diffusion simulation
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krishna / Laminin_network
Creative Commons Zero v1.0 UniversalHexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.
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walker / NNet_simple
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Slicing lc ms data into time ... slices, to run lipidxplorer on the slices
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BioImage Informatics / SkeletonAnalysis
BSD 3-Clause "New" or "Revised" LicenseUpdated -
tomancaklab / ellipsoid-projection
BSD 2-Clause "Simplified" LicensePlugin to fit and unwrap ellipsoid surfaces
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Scientific Computing / bioimage_team / unet2d_base
BSD 3-Clause "New" or "Revised" LicenseImplementation of 2D unet. Use as base for user projects.
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labShevchenko / PeakStrainer
MIT LicenseUpdated